Peptide Synthesis

 

1.      The General Principles

Peptides are arbitrarily considered as sequences of amino acids of up to about 100 residues. Their importance in biological processes from the most humble bacteria to the most complex mammal is beyond doubt, having roles as diverse as neurotransmition and antibiotic activity; in addition they function as hormones and toxins. This wide spectrum of activity marks them out as a class of compounds of significant interest in areas from medicinal chemistry through to molecular biology.

It is thus not surprising that many years of effort have gone into developing suitable synthetic methodologies.  The basic principles that lie at the heart of the subject and the most commonly used protocols are overviewed here.

For the purpose of peptide synthesis, amino acids can be considered as having two main functionalities to manipulate, i.e. the  a-amino and carboxyl groups. Functional groupings are also present in the side chains of many of the principle amino acids. These functionalities must be protected so that they do not interfere with the formation of the peptide bond.

With respect to peptide bond formation there are four main steps: Protection, activation, coupling and selective deprotection (Figure). We will start by looking at activation and coupling, then protection and deprotection and finally synthesis of peptides in solution and on a solid support.

 

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